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 Oligonucleotide derivatives and production thereof

Details
Inventors: Miyoshi, Kenichi; Fuwa, Toru;
Assignee: Wakunaga Seiyaku Kabushiki Kaisha (Osaka, JP)
Primary Examiner: Brown; Johnnie R.
Assistant Examiner: Tou; Jenny
Attorney, Agent or Firm: Oblon, Fisher, Spivak, McClelland & Maier

An oligonucleotide derivative having an amino group protected with an eliminatable group bonded through a phosphate group and a spacer with an appropriate length to the 5'-end of an oligonucleotide protected suitably at the 3'-hydroxyl group and the base moiety of the nucleotide, and an immobilized oligonucleotide derivative having a Sepharose carrier bonded to the amino group in place of said protective group are disclosed. Methods for production of these derivatives are also disclosed.

DETAILED DESCRIPTION Gist In view of the state of the art as described above, the present inventors have developed an immobilized oligonucleotide which is useful in purification of nucleic acids and is utilizable for affinity resins, and a method of producing the same.
The present inventors have previously developed a method of synthesizing a completely protected oligonucleotide according to the solid-phase synthetic method.
The present inventors have found a method for immobilization, which comprises introducing a functional group capable of being bound with another carrier into the 5'-hydroxyl group of the objective compound synthesized by the solid-phase synthetic method, so as to be bound at said functional group to the carrier.
According to this method, the present inventors have succeeded in synthesizing effectively an immobilized oligonucleotide, in which an oligonucleotide having any desired base sequence is bound at a specific position to a carrier.
The present invention concerns immobilized oligonucleotide derivatives, which can be used also as affinity resins as well as a plural number of oligonucleotide derivatives which can be used as intermediates thereof, and a method for production thereof.
More specifically, the oligonucleotide derivatives according to the present invention can be represented by the following formulae (2), (4) and (5).
The method of producing the oligonucleotide derivatives represented by the following formulae (2), (4) and (5), as expressed conceptionally and comprehensively, comprises causing a compound (1) to react with a compound (0) to produce a compound (2), while, on the other hand, condensing a compound (3') obtained by the nucleic acid synthetic method with a compound (2') which is a derivative of the compound (2) from which the protective group R.
sup.
3 of the 3'-phosphate has been eliminated to produce a compound (4), and removing all the protective groups from this compound to produce a compound (5).
HO(N'.
sub.
p.
sbsb.
x).
sub.
m --R.
sup.
3 ( 0) R



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